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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7087038 chr10:88866129 C/G FAM35B chr10:46897641-46939143:+ -0.37 -7.27 1.44E-12 Box Plot
THCA rs7088088 chr10:51816767 C/T FAM21B chr10:47894023-47949412:+ 0.56 7.29 1.27E-12 Box Plot
THCA rs7089892 chr10:45828870 T/A AGAP8 chr10:51224681-51371321:- 0.45 6.07 2.62E-9 Box Plot
THCA rs7090595 chr10:99188961 C/T HECTD1 chr14:31569318-31677010:- -0.18 -6.01 3.68E-9 Box Plot
THCA rs7092476 chr10:52023306 C/T FAM21B chr10:47894023-47949412:+ -0.38 -6.45 2.7E-10 Box Plot
THCA rs70947093 chr4:108634929 G/GA MRPL38 chr17:73894724-73901494:- 0.26 5.87 8.02E-9 Box Plot
THCA rs7095806 chr10:46071088 G/A AGAP7 chr10:51464162-51486327:- 0.36 6.38 4.3E-10 Box Plot
THCA rs7096829 chr10:88858196 G/T FAM35B chr10:46897641-46939143:+ -0.36 -7.04 6.77E-12 Box Plot
THCA rs7097164 chr10:51818495 C/A FAM21B chr10:47894023-47949412:+ 0.58 7.62 1.38E-13 Box Plot
THCA rs70977272 chr6:26361656 ATTTTTTT/A RNF5P1 chr8:38458179-38458718:- 0.59 6.35 4.97E-10 Box Plot
THCA rs7098047 chr10:45828082 C/A AGAP8 chr10:51224681-51371321:- 0.45 6.07 2.62E-9 Box Plot
THCA rs70981105 chr6:26668832 TG/T ZFP57 chr6:29640169-29648887:- 0.77 7.6 1.58E-13 Box Plot
THCA rs70983923 chr6:27914359 AAATGAACTGAAGGAGAGGT BTN3A2 chr6:26365387-26378548:+ -0.84 -11.97 4.55E-29 Box Plot
THCA rs70983923 chr6:27914359 AAATGAACTGAAGGAGAGGT RNF5P1 chr8:38458179-38458718:- 0.72 6.32 6.1E-10 Box Plot
THCA rs70983923 chr6:27914359 AAATGAACTGAAGGAGAGGT ZFP57 chr6:29640169-29648887:- 0.94 8.94 8.25E-18 Box Plot